Genomics and Bioinformatics

 

Facility Manager
Asst.Prof. Yavuz Oktay
Members
Asst.Prof. Gökhan Karakülah
Dr.Vanesa Segovia

High capacity and quality DNA / RNA sequencing by next generation sequencing (NGS), as well as standard and advanced bioinformatics analyzes can be done in our unit.

The following services are provided:
NGS:
1) Whole Genome Sequencing (WGS)
2) Whole Exome Sequencing (WES)
3) Targeted DNA (panel) sequencing
4) Transcriptome Sequencing (RNA-seq)
5) Chromatin Immunoprecipitation (ChIP) Sequencing (ChIP-Seq)
6) Whole Genome and Targeted Methylation Sequencing (WGBS and Methyl-Seq)
7) Metagenome Sequencing / Species Identification (16S rRNA-seq)
8) HLA Sequencing (HLA typing with NGS)
9) VDJ-seq
10) Standard Bioinformatics Analysis
11) Advanced Bioinformatics Analysis
Other:
12) Sanger Sequencing
13) qPCR for Gene Expression Analysis
14) Quantification of DNA Copy Number by qPCR
15) RNA & DNA isolation and Quality control
16) Plasmid Sub-cloning
17) MLPA
18) Free DNA Isolation from Blood and Digital PCR Analysis (coming soon)
19) CRISPR/cas9 Genome Editing of Cells in Culture (coming soon)